EnhancerDB
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  3. rs117338520[chr1:52418387]
Enhancers that have rs117338520[chr1:52418387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52410065 52425504 enh361
Brain (SK-N-MC) Prostate (RWPE1) Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9)
Transcript factors that have rs117338520[chr1:52418387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52418381 52418395 GATA2 JASPAR yes 28877370
chr1 52418381 52418396 LEF1 JASPAR yes 28877371
chr1 52418383 52418391 GATA3 JASPAR yes 28877372
Genes associated with rs117338520[chr1:52418387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More