EnhancerDB
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  3. rs117340592[chr1:46343040]
Enhancers that have rs117340592[chr1:46343040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46325665 46343935 enh326
Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs117340592[chr1:46343040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46343036 46343045 SNAI2 JASPAR yes 28624884
chr1 46343036 46343046 ID4 JASPAR yes 28624885
chr1 46343036 46343046 TCF3 JASPAR yes 28624886
chr1 46343036 46343046 TCF4 JASPAR yes 28624887
Genes associated with rs117340592[chr1:46343040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More