EnhancerDB
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  3. rs117386925[chr1:171182353]
Enhancers that have rs117386925[chr1:171182353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171180715 171184865 enh67167
Neural Stem Cells (H9)
Transcript factors that have rs117386925[chr1:171182353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171182343 171182360 RARA JASPAR yes 33066916
chr1 171182345 171182355 ALX3 JASPAR yes 33066917
chr1 171182345 171182355 ESX1 JASPAR yes 33066918
chr1 171182345 171182355 GBX2 JASPAR yes 33066919
chr1 171182345 171182355 GSX1 JASPAR yes 33066920
chr1 171182345 171182355 GSX2 JASPAR yes 33066921
chr1 171182345 171182355 HESX1 JASPAR yes 33066922
chr1 171182345 171182355 LBX2 JASPAR yes 33066923
chr1 171182345 171182355 LHX2 JASPAR yes 33066924
chr1 171182345 171182355 MIXL1 JASPAR yes 33066925
chr1 171182345 171182355 MNX1 JASPAR yes 33066926
chr1 171182345 171182355 RAX JASPAR yes 33066927
chr1 171182346 171182354 BARX1 JASPAR yes 33066931
chr1 171182346 171182354 BSX JASPAR yes 33066932
chr1 171182346 171182354 DLX6 JASPAR yes 33066933
chr1 171182346 171182354 ISX JASPAR yes 33066934
chr1 171182346 171182354 LBX1 JASPAR yes 33066935
chr1 171182346 171182354 LHX9 JASPAR yes 33066936
chr1 171182346 171182354 MSX1 JASPAR yes 33066937
chr1 171182346 171182354 MSX2 JASPAR yes 33066938
chr1 171182346 171182354 NKX6-2 JASPAR yes 33066939
chr1 171182346 171182354 PRRX1 JASPAR yes 33066940
chr1 171182346 171182354 RAX2 JASPAR yes 33066941
chr1 171182346 171182354 SHOX JASPAR yes 33066942
chr1 171182346 171182354 UNCX JASPAR yes 33066943
chr1 171182346 171182356 HOXB13 JASPAR yes 33066944
chr1 171182346 171182356 HOXD13 JASPAR yes 33066945
Genes associated with rs117386925[chr1:171182353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More