EnhancerDB
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  3. rs117593268[chr19:2067687]
Enhancers that have rs117593268[chr19:2067687]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2053625 2070755 enh4956
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Heart
Transcript factors that have rs117593268[chr19:2067687]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2067673 2067688 SOX21 JASPAR yes 112046926
chr19 2067677 2067687 HOXA13 JASPAR yes 112046927
chr19 2067677 2067687 HOXB13 JASPAR yes 112046928
chr19 2067677 2067687 HOXD13 JASPAR yes 112046929
chr19 2067678 2067687 CDX1 JASPAR yes 112046930
chr19 2067683 2067688 TFAP2A TRANSFAC yes 112046931
chr19 2067683 2067689 MZF1 JASPAR yes 112046932
chr19 2067684 2067698 RXRG JASPAR yes 112046933
chr19 2067684 2067699 HNF4A JASPAR yes 112046934
Genes associated with rs117593268[chr19:2067687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 1383526 1395583 + NDUFS7 ENSG00000115286.15 1383526 672104 Liver 0.168732 16744