EnhancerDB
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  3. rs117620865[chr19:719992]
Enhancers that have rs117620865[chr19:719992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 718125 722275 enh109819
Stomach
chr19 719892 720284 vista28102
VISTA
Transcript factors that have rs117620865[chr19:719992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 718142 720812 ZNF274 GTRD no Bone Marrow (K562) 108345765
chr19 718211 721539 TCF7L2 GTRD no Colon (HCT116) 108345766
chr19 718265 720165 TCF7L2 GTRD no Colon (HCT116) 108345767
chr19 718286 720490 TCF7L2 GTRD no Colon (HCT116) 108345768
chr19 718341 721228 TCF7L2 GTRD no Colon (HCT116) 108345769
chr19 718570 720863 TCF7L2 GTRD no Colon (HCT116) 108345771
chr19 718623 720720 TCF7L2 GTRD no Colon (HCT116) 108345772
chr19 718736 720817 TCF7L2 GTRD no Colon (HCT116) 108345773
chr19 718750 720571 TCF7L2 GTRD no Colon (HCT116) 108345774
chr19 718864 720511 ZNF274 GTRD no Bone Marrow (K562) 108345775
chr19 718942 720036 ZNF274 GTRD no Bone Marrow (K562) 108345777
chr19 718947 720386 ZNF274 GTRD no Bone Marrow (K562) 108345778
chr19 719008 720150 ZNF274 GTRD no Bone Marrow (K562) 108345780
chr19 719678 720191 TCF7L2 GTRD no Colon (HCT116) 108345784
chr19 719846 720398 ZNF274 GTRD no Liver (HepG2) 108345785
chr19 719913 721040 TCF7L2 GTRD no Colon (HCT116) 108345786
chr19 719952 720691 TCF7L2 GTRD no Colon (HCT116) 108345787
chr19 719983 720403 ZNF274 GTRD no Blood (GM12878) 108345788
chr19 719986 720329 ZNF274 GTRD no Bone Marrow (K562) 108345789
chr19 719991 719998 SP1 TRANSFAC yes 70776895
chr19 719991 719998 SP1 TRANSFAC yes 111970687
Genes associated with rs117620865[chr19:719992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 571297 583493 + BSG ENSG00000172270.14 571297 136499 Breast 0.420759 16707