EnhancerDB
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  3. rs117884542[chr17:38398639]
Enhancers that have rs117884542[chr17:38398639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38396950 38410272 enh17139
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Adrenal Lung (PC-9) Muscle (Myoblast) Uterus
Transcript factors that have rs117884542[chr17:38398639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38398618 38398639 IRF1 JASPAR yes 54200924
chr17 38398618 38398639 ZNF263 JASPAR yes 54200925
chr17 38398624 38398645 IRF1 JASPAR yes 54200927
chr17 38398626 38398641 IRF9 JASPAR yes 54200928
chr17 38398628 38398643 STAT2 JASPAR yes 54200929
chr17 38398637 38398653 SOX4 JASPAR yes 54200930
Genes associated with rs117884542[chr17:38398639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More