EnhancerDB
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  3. rs11806365[chr1:42196291]
Enhancers that have rs11806365[chr1:42196291]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42174680 42197130 enh289
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Thymus Heart
Transcript factors that have rs11806365[chr1:42196291]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42196287 42196305 MAFF JASPAR yes 28415013
chr1 42196288 42196292 NFE TRANSFAC yes 28415014
chr1 42196288 42196293 GATA1 TRANSFAC yes 28415015
chr1 42196288 42196294 GATA3 JASPAR yes 28415016
Genes associated with rs11806365[chr1:42196291], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 41492872 41707826 - SCMH1 ENSG00000010803.12 41707826 488465 Liver 0.0217766 574