EnhancerDB
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  3. rs11812016[chr1:117030719]
Enhancers that have rs11812016[chr1:117030719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11812016[chr1:117030719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117029073 117030978 ZNF274 GTRD no Bone Marrow (K562) 21332995
chr1 117029073 117030978 ZNF274 GTRD no Bone Marrow (K562) 107824318
chr1 117030698 117030719 ZNF263 JASPAR yes 31812655
chr1 117030712 117030975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333018
chr1 117030712 117030975 TFAP2C UCSC Txn Factor no Conserved 107824319
chr1 117030712 117030975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824320
Genes associated with rs11812016[chr1:117030719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 117452679 117532980 + PTGFRN ENSG00000134247.9 117452679 421960 Uterus 0.256672 1065