EnhancerDB
  1. Home
  2. SNP
  3. rs11859828[chr16:88538765]
Enhancers that have rs11859828[chr16:88538765]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88521345 88553535 enh4185
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Liver Blood (T-cell) Lung Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Thymus Heart
Transcript factors that have rs11859828[chr16:88538765]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88534755 88538907 ZNF274 GTRD no Liver (HepG2) 108222309
chr16 88534755 88538907 ZNF274 GTRD no Liver (HepG2) 108222310
chr16 88534755 88538907 ZNF274 GTRD no Liver (HepG2) 108222311
chr16 88536178 88538996 TCF7L2 GTRD no Colon (HCT116) 21736505
chr16 88536178 88538996 TCF7L2 GTRD no Colon (HCT116) 108222372
chr16 88536178 88538996 TCF7L2 GTRD no Colon (HCT116) 108222373
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 21736506
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 108222374
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 108222375
chr16 88536250 88541434 TCF7L2 GTRD no Colon (HCT116) 108222376
chr16 88536987 88538920 TCF7L2 GTRD no Colon (HCT116) 21736510
chr16 88536987 88538920 TCF7L2 GTRD no Colon (HCT116) 108222390
chr16 88537003 88541599 TCF7L2 GTRD no Colon (HCT116) 21736511
chr16 88537003 88541599 TCF7L2 GTRD no Colon (HCT116) 108222393
chr16 88537003 88541599 TCF7L2 GTRD no Colon (HCT116) 108222394
chr16 88537003 88541620 ZNF143 GTRD no Epithelial (MCF-7) 21736512
chr16 88537003 88541620 ZNF143 GTRD no Epithelial (MCF-7) 108222395
chr16 88537003 88541620 ZNF143 GTRD no Epithelial (MCF-7) 108222396
chr16 88537004 88539156 ZNF143 GTRD no Epithelial (MCF-7) 21736513
chr16 88537004 88539156 ZNF143 GTRD no Epithelial (MCF-7) 108222397
chr16 88537015 88541479 ZNF143 GTRD no Epithelial (MCF-7) 21736514
chr16 88537015 88541479 ZNF143 GTRD no Epithelial (MCF-7) 108222398
chr16 88537015 88541479 ZNF143 GTRD no Epithelial (MCF-7) 108222399
chr16 88537038 88541533 ZNF143 GTRD no Epithelial (MCF-7) 21736516
chr16 88537038 88541533 ZNF143 GTRD no Epithelial (MCF-7) 108222401
chr16 88537038 88541533 ZNF143 GTRD no Epithelial (MCF-7) 108222402
chr16 88537053 88541508 ZNF143 GTRD no Epithelial (MCF-7) 21736518
chr16 88537053 88541508 ZNF143 GTRD no Epithelial (MCF-7) 108222405
chr16 88537053 88541508 ZNF143 GTRD no Epithelial (MCF-7) 108222406
chr16 88537077 88541461 TCF7L2 GTRD no Colon (HCT116) 21736519
chr16 88537077 88541461 TCF7L2 GTRD no Colon (HCT116) 108222407
chr16 88537077 88541461 TCF7L2 GTRD no Colon (HCT116) 108222408
chr16 88537269 88539090 TCF7L2 GTRD no Colon (HCT116) 21736526
chr16 88537269 88539090 TCF7L2 GTRD no Colon (HCT116) 108222423
chr16 88538751 88538772 IRF1 JASPAR yes 12288266
chr16 88538752 88538773 IRF1 JASPAR yes 12288267
chr16 88538754 88538769 PRDM1 JASPAR yes 12288268
chr16 88538756 88538777 IRF1 JASPAR yes 12288269
chr16 88538757 88538772 FOXP1 JASPAR yes 12288270
chr16 88538757 88538778 IRF1 JASPAR yes 12288271
chr16 88538758 88538779 IRF1 JASPAR yes 12288272
chr16 88538759 88538774 FOXP1 JASPAR yes 12288273
chr16 88538759 88538780 IRF1 JASPAR yes 12288274
chr16 88538760 88538781 IRF1 JASPAR yes 12288275
chr16 88538761 88538776 FOXP1 JASPAR yes 12288276
chr16 88538762 88538777 FOXP1 JASPAR yes 12288277
chr16 88538763 88538778 FOXP1 JASPAR yes 12288278
chr16 88538764 88538779 FOXP1 JASPAR yes 12288279
chr16 88538765 88538780 FOXP1 JASPAR yes 12288280
Genes associated with rs11859828[chr16:88538765], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More