EnhancerDB
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  3. rs12029349[chr1:116372092]
Enhancers that have rs12029349[chr1:116372092]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116368200 116375839 enh61894
Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (Myoblast) Uterus Epithelial (MCF-7)
Transcript factors that have rs12029349[chr1:116372092]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116370732 116377142 ZNF143 GTRD no Epithelial (MCF-7) 21331307
chr1 116370732 116377142 ZNF143 GTRD no Epithelial (MCF-7) 107823820
chr1 116371578 116377159 ZNF143 GTRD no Epithelial (MCF-7) 21331308
chr1 116371581 116376894 ZNF143 GTRD no Epithelial (MCF-7) 21331309
chr1 116371587 116373556 ZNF143 GTRD no Epithelial (MCF-7) 21331310
chr1 116371606 116379587 ZNF143 GTRD no Epithelial (MCF-7) 21331311
chr1 116371729 116372669 ZNF143 GTRD no Epithelial (MCF-7) 21331312
chr1 116371750 116375707 ZNF143 GTRD no Epithelial (MCF-7) 21331313
chr1 116371790 116375674 ZNF143 GTRD no Epithelial (MCF-7) 21331314
chr1 116371926 116374758 ZNF143 GTRD no Epithelial (MCF-7) 21331315
chr1 116371965 116375186 ZNF143 GTRD no Epithelial (MCF-7) 21331316
chr1 116371993 116372489 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21331317
chr1 116371993 116375122 ZNF143 GTRD no Epithelial (MCF-7) 21331318
chr1 116372029 116375753 ZNF143 GTRD no Epithelial (MCF-7) 21331319
chr1 116372072 116374650 ZNF143 GTRD no Epithelial (MCF-7) 21331320
chr1 116372076 116372266 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21331321
chr1 116372082 116372092 SP1 JASPAR yes 31761958
chr1 116372083 116372098 TFAP2C JASPAR yes 31761959
chr1 116372085 116372097 INSM1 JASPAR yes 31761960
chr1 116372086 116372097 TFAP2A JASPAR yes 31761961
chr1 116372086 116372097 TFAP2B JASPAR yes 31761962
chr1 116372087 116372096 TFAP2A JASPAR yes 31761963
chr1 116372087 116374926 ZNF143 GTRD no Epithelial (MCF-7) 21331322
chr1 116372089 116375238 ZNF143 GTRD no Epithelial (MCF-7) 21331323
Genes associated with rs12029349[chr1:116372092], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 116378998 116386538 - NHLH2 ENSG00000177551.5 116386538 6906 Esophagus 9.32356e-05 1056