EnhancerDB
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  3. rs12030637[chr1:200408182]
Enhancers that have rs12030637[chr1:200408182]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs12030637[chr1:200408182]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200403827 200409116 AR GTRD no Prostate (PC-3) 21363470
chr1 200406760 200409298 ZNF274 GTRD no Cervix (HeLa-S3) 21363481
chr1 200407168 200412701 ZNF143 GTRD no Epithelial (MCF-7) 21363483
chr1 200407396 200408293 ZNF143 GTRD no Epithelial (MCF-7) 21363484
chr1 200407733 200408305 ZNF143 GTRD no Epithelial (MCF-7) 21363487
chr1 200407838 200408294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363488
chr1 200408174 200408184 HOXC10 JASPAR yes 34447352
chr1 200408174 200408184 HOXD13 JASPAR yes 34447353
chr1 200408174 200408185 HOXC11 JASPAR yes 34447354
chr1 200408174 200408185 HOXC13 JASPAR yes 34447355
chr1 200408175 200408185 GSX2 JASPAR yes 34447356
chr1 200408176 200408184 NKX6-1 JASPAR yes 34447357
chr1 200408176 200408184 NKX6-2 JASPAR yes 34447358
chr1 200408176 200408186 POU6F2 JASPAR yes 34447359
Genes associated with rs12030637[chr1:200408182], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More