EnhancerDB
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  3. rs12035688[chr1:222144780]
Enhancers that have rs12035688[chr1:222144780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 222129374 222148777 enh27556
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Lung (A549) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 222144602 222144957 vista5232
VISTA
Transcript factors that have rs12035688[chr1:222144780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222144770 222144785 NR2C2 JASPAR yes 35587409
chr1 222144770 222144785 NR2C2 JASPAR yes 118465312
chr1 222144773 222144782 SP1 TRANSFAC yes 35587410
chr1 222144773 222144782 SP1 TRANSFAC yes 118465313
chr1 222144774 222144780 SP1 TRANSFAC yes 35587411
chr1 222144774 222144780 SP1 TRANSFAC yes 118465314
chr1 222144774 222144784 SP1 JASPAR yes 35587412
chr1 222144774 222144784 SP1 JASPAR yes 118465315
chr1 222144775 222144782 SP1 TRANSFAC yes 35587413
chr1 222144775 222144782 SP1 TRANSFAC yes 118465316
chr1 222144776 222144781 SP1 TRANSFAC yes 35587414
chr1 222144776 222144781 SP1 TRANSFAC yes 118465317
chr1 222144776 222144782 SP1 TRANSFAC yes 35587415
chr1 222144776 222144782 SP1 TRANSFAC yes 118465318
chr1 222144778 222144789 NRF1 JASPAR yes 35587416
chr1 222144778 222144789 NRF1 JASPAR yes 118465319
chr1 222144780 222144790 SP1 JASPAR yes 35587417
chr1 222144780 222144790 SP1 JASPAR yes 118465320
Genes associated with rs12035688[chr1:222144780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More