EnhancerDB
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  3. rs12035954[chr1:17239289]
Enhancers that have rs12035954[chr1:17239289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs12035954[chr1:17239289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17238935 17240465 ZBTB33 GTRD no Lung (A549) 107802245
chr1 17239285 17239289 H1TF2 TRANSFAC yes 27064938
chr1 17239285 17239289 NFE TRANSFAC yes 27064939
chr1 17239285 17239289 SRF TRANSFAC yes 27064940
Genes associated with rs12035954[chr1:17239289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More