EnhancerDB
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  3. rs12039898[chr1:43430435]
Enhancers that have rs12039898[chr1:43430435]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43426314 43451580 enh11804
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12039898[chr1:43430435]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43430416 43430435 REST JASPAR yes 28471414
chr1 43430433 43430441 RHOXF1 JASPAR yes 28471415
Genes associated with rs12039898[chr1:43430435], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 43212006 43232755 - LEPRE1 ENSG00000117385.11 43232755 197680 Lung 0.125936 588