-
Home
- SNP
- rs12040095[chr1:220393414]
Enhancers that have rs12040095[chr1:220393414]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
220393257 |
220393560 |
vista5153 |
|
|
Transcript factors that have rs12040095[chr1:220393414]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
220393040
|
220394259
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107870922
|
|
|
chr1
|
220393040
|
220394259
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107870923
|
|
|
chr1
|
220393040
|
220394259
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870924
|
|
|
chr1
|
220393040
|
220394259
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870925
|
|
|
chr1
|
220393138
|
220393418
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107870927
|
|
|
chr1
|
220393140
|
220393416
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
107870928
|
|
|
chr1
|
220393205
|
220393525
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870930
|
|
|
chr1
|
220393212
|
220393696
|
RELA
|
UCSC Txn Factor
|
no
|
Conserved
|
107870931
|
|
|
chr1
|
220393231
|
220393511
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870932
|
|
|
chr1
|
220393238
|
220393868
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870933
|
|
|
chr1
|
220393240
|
220393836
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870934
|
|
|
chr1
|
220393255
|
220393685
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870935
|
|
|
chr1
|
220393259
|
220393919
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870936
|
|
|
chr1
|
220393259
|
220393919
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870937
|
|
|
chr1
|
220393261
|
220393557
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870938
|
|
|
chr1
|
220393290
|
220393700
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870939
|
|
|
chr1
|
220393313
|
220393693
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870940
|
|
|
chr1
|
220393324
|
220393518
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870941
|
|
|
chr1
|
220393329
|
220393893
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870942
|
|
|
chr1
|
220393333
|
220393613
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870943
|
|
|
chr1
|
220393337
|
220393837
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870944
|
|
|
chr1
|
220393350
|
220393786
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870945
|
|
|
chr1
|
220393351
|
220393506
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870946
|
|
|
chr1
|
220393361
|
220393604
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870947
|
|
|
chr1
|
220393371
|
220393681
|
POU2F2
|
UCSC Txn Factor
|
no
|
Conserved
|
107870948
|
|
|
chr1
|
220393371
|
220393751
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870949
|
|
|
chr1
|
220393385
|
220393785
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870950
|
|
|
chr1
|
220393389
|
220393753
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870951
|
|
|
chr1
|
220393398
|
220393679
|
RUNX3
|
UCSC Txn Factor
|
no
|
Conserved
|
107870952
|
|
|
chr1
|
220393398
|
220393679
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870953
|
|
|
chr1
|
220393402
|
220393662
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870954
|
|
|
chr1
|
220393403
|
220393839
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870955
|
|
|
chr1
|
220393407
|
220393420
|
NFKB1
|
JASPAR
|
yes
|
|
118461025
|
|
|
chr1
|
220393407
|
220393420
|
NFKB2
|
JASPAR
|
yes
|
|
118461026
|
|
|
chr1
|
220393408
|
220393419
|
NFKB1
|
JASPAR
|
yes
|
|
118461027
|
|
|
chr1
|
220393409
|
220393419
|
NFKB1
|
JASPAR
|
yes
|
|
118461028
|
|
|
chr1
|
220393411
|
220393742
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870956
|
|
|
chr1
|
220393411
|
220393751
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870957
|
|
|
chr1
|
220393414
|
220393718
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107870958
|
|
Genes associated with rs12040095[chr1:220393414], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |