EnhancerDB
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  3. rs12040490[chr1:183239177]
Enhancers that have rs12040490[chr1:183239177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183231145 183244789 enh12448
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs12040490[chr1:183239177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183239170 183239180 SP1 JASPAR yes 33666970
chr1 183239170 183239189 PAX5 JASPAR yes 33666971
chr1 183239173 183239178 SP1 TRANSFAC yes 33666972
Genes associated with rs12040490[chr1:183239177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More