EnhancerDB
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  3. rs12048976[chr1:42224130]
Enhancers that have rs12048976[chr1:42224130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12048976[chr1:42224130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42224117 42224134 PAX1 JASPAR yes 28418536
chr1 42224117 42224134 PAX9 JASPAR yes 28418537
chr1 42224118 42224132 PAX6 JASPAR yes 28418538
chr1 42224118 42224137 PAX5 JASPAR yes 28418539
Genes associated with rs12048976[chr1:42224130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More