EnhancerDB
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  3. rs12058555[chr1:8089456]
Enhancers that have rs12058555[chr1:8089456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8089365 8111955 enh11459
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12058555[chr1:8089456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8088588 8098693 TCF7L2 GTRD no Colon (HCT116) 21325212
chr1 8089449 8089464 MEF2A JASPAR yes 26501267
chr1 8089450 8089465 MEF2C JASPAR yes 26501268
chr1 8089452 8089464 FOXI1 JASPAR yes 26501269
chr1 8089453 8089465 FOXC2 JASPAR yes 26501270
chr1 8089453 8089466 POU2F2 JASPAR yes 26501271
chr1 8089455 8089459 YY1 TRANSFAC yes 26501272
Genes associated with rs12058555[chr1:8089456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More