EnhancerDB
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  3. rs12059878[chr1:220535395]
Enhancers that have rs12059878[chr1:220535395]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs12059878[chr1:220535395]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220535394 220535398 H1TF2 TRANSFAC yes 35488101
chr1 220535394 220535398 NFE TRANSFAC yes 35488102
chr1 220535394 220535398 SRF TRANSFAC yes 35488103
Genes associated with rs12059878[chr1:220535395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More