EnhancerDB
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  3. rs12059980[chr1:42356812]
Enhancers that have rs12059980[chr1:42356812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs12059980[chr1:42356812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42356616 42356980 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107802988
chr1 42356799 42356816 BCL6B JASPAR yes 28434316
chr1 42356800 42356815 STAT1 JASPAR yes 28434317
chr1 42356802 42356813 STAT1 JASPAR yes 28434319
chr1 42356802 42356813 STAT3 JASPAR yes 28434320
Genes associated with rs12059980[chr1:42356812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More