EnhancerDB
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  3. rs12060898[chr1:230887539]
Enhancers that have rs12060898[chr1:230887539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230883525 230890435 enh67310
Prostate (PC-3) Liver (HepG2) Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Neural Stem Cells (H9)
chr1 230886439 230890074 vista145
VISTA
chr1 230887462 230887658 vista5510
VISTA
Transcript factors that have rs12060898[chr1:230887539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230887327 230887667 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391734
chr1 230887327 230887667 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107686554
chr1 230887327 230887667 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107879006
chr1 230887347 230887683 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391735
chr1 230887347 230887683 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107879007
chr1 230887364 230887664 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391736
chr1 230887364 230887664 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107879008
chr1 230887372 230888042 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21391737
chr1 230887372 230888042 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107879009
chr1 230887373 230887697 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21391738
chr1 230887373 230887697 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107879010
chr1 230887393 230887653 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391739
chr1 230887393 230887653 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107879011
chr1 230887406 230887607 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391740
chr1 230887406 230887607 FOXA1 UCSC Txn Factor no Conserved 107879012
chr1 230887406 230887607 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107879013
chr1 230887413 230887673 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21391741
chr1 230887413 230887673 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107879014
chr1 230887414 230887635 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391742
chr1 230887414 230887635 FOXA2 UCSC Txn Factor no Conserved 107879015
chr1 230887414 230887635 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107879016
chr1 230887418 230887668 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21391743
chr1 230887418 230887668 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107879017
chr1 230887435 230887609 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21391744
chr1 230887435 230887609 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107879018
chr1 230887531 230887542 FOXA1 JASPAR yes 36062659
chr1 230887531 230887542 FOXA1 JASPAR yes 71161582
chr1 230887531 230887542 FOXA1 JASPAR yes 118478758
chr1 230887531 230887546 FOXA1 JASPAR yes 36062660
chr1 230887531 230887546 FOXA1 JASPAR yes 71161583
chr1 230887531 230887546 FOXA1 JASPAR yes 118478759
chr1 230887532 230887543 FOXC1 JASPAR yes 36062661
chr1 230887532 230887543 FOXC1 JASPAR yes 71161584
chr1 230887532 230887543 FOXC1 JASPAR yes 118478760
chr1 230887532 230887544 FOXC2 JASPAR yes 36062662
chr1 230887532 230887544 FOXC2 JASPAR yes 71161585
chr1 230887532 230887544 FOXC2 JASPAR yes 118478761
chr1 230887538 230887548 TEAD1 JASPAR yes 36062663
chr1 230887538 230887548 TEAD4 JASPAR yes 36062664
chr1 230887538 230887548 TEAD1 JASPAR yes 71161586
chr1 230887538 230887548 TEAD4 JASPAR yes 71161587
chr1 230887538 230887548 TEAD1 JASPAR yes 118478762
chr1 230887538 230887548 TEAD4 JASPAR yes 118478763
chr1 230887538 230887550 TEAD1 JASPAR yes 36062665
chr1 230887538 230887550 TEAD1 JASPAR yes 71161588
chr1 230887538 230887550 TEAD1 JASPAR yes 118478764
chr1 230887539 230887547 TEAD3 JASPAR yes 36062666
chr1 230887539 230887547 TEAD3 JASPAR yes 71161589
chr1 230887539 230887547 TEAD3 JASPAR yes 118478765
Genes associated with rs12060898[chr1:230887539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More