EnhancerDB
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  3. rs12065413[chr1:89774477]
Enhancers that have rs12065413[chr1:89774477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 89773625 89779735 enh12024
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (T-cell) Kidney
Transcript factors that have rs12065413[chr1:89774477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 89774463 89774477 ONECUT2 JASPAR yes 30592904
chr1 89774463 89774477 ONECUT3 JASPAR yes 30592905
chr1 89774467 89774478 CDX2 JASPAR yes 30592907
chr1 89774467 89774481 FOXF2 JASPAR yes 30592908
chr1 89774467 89774482 FOXP1 JASPAR yes 30592909
chr1 89774468 89774479 FOXH1 JASPAR yes 30592910
chr1 89774468 89774484 SOX8 JASPAR yes 30592911
chr1 89774469 89774478 CDX1 JASPAR yes 30592912
chr1 89774469 89774479 HOXA13 JASPAR yes 30592913
chr1 89774469 89774481 FOXC2 JASPAR yes 30592914
chr1 89774469 89774485 POU4F3 JASPAR yes 30592915
chr1 89774470 89774481 FOXP2 JASPAR yes 30592916
chr1 89774471 89774485 POU4F1 JASPAR yes 30592917
chr1 89774472 89774480 FOXG1 JASPAR yes 30592918
chr1 89774472 89774480 FOXO3 JASPAR yes 30592919
chr1 89774472 89774481 SRY JASPAR yes 30592920
chr1 89774474 89774483 SOX9 JASPAR yes 30592921
chr1 89774474 89774490 SOX4 JASPAR yes 30592922
chr1 89774475 89774490 SOX21 JASPAR yes 30592923
chr1 89774475 89774491 SOX4 JASPAR yes 30592924
chr1 89774475 89774491 SOX8 JASPAR yes 30592925
Genes associated with rs12065413[chr1:89774477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More