EnhancerDB
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  3. rs12066278[chr1:55261626]
Enhancers that have rs12066278[chr1:55261626]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55256157 55264035 enh11874
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Bone (Osteoblast) Placenta Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs12066278[chr1:55261626]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55261623 55261635 HES5 JASPAR yes 28999158
chr1 55261623 55261635 HES7 JASPAR yes 28999159
chr1 55261624 55261634 BHLHE40 JASPAR yes 28999160
chr1 55261624 55261634 BHLHE41 JASPAR yes 28999161
chr1 55261624 55261634 CLOCK JASPAR yes 28999162
chr1 55261624 55261634 HEY1 JASPAR yes 28999163
chr1 55261624 55261634 HEY2 JASPAR yes 28999164
chr1 55261624 55261634 MAX JASPAR yes 28999165
chr1 55261624 55261634 MNT JASPAR yes 28999166
chr1 55261624 55261634 TFE3 JASPAR yes 28999167
chr1 55261625 55261635 MAX JASPAR yes 28999168
chr1 55261626 55261631 MYC TRANSFAC yes 28999169
chr1 55261626 55261631 USF1 TRANSFAC yes 28999170
chr1 55261626 55261631 USF2 TRANSFAC yes 28999171
Genes associated with rs12066278[chr1:55261626], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More