EnhancerDB
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  3. rs12078178[chr1:43462766]
Enhancers that have rs12078178[chr1:43462766]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12078178[chr1:43462766]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43462759 43462770 USF1 JASPAR yes 28475791
chr1 43462759 43462770 USF2 JASPAR yes 28475792
chr1 43462759 43462771 PKNOX2 JASPAR yes 28475793
chr1 43462760 43462767 USF2 TRANSFAC yes 28475794
chr1 43462760 43462770 SREBF1 JASPAR yes 28475795
chr1 43462760 43462770 SREBF2 JASPAR yes 28475796
chr1 43462760 43462770 TFEC JASPAR yes 28475797
chr1 43462760 43462771 USF1 JASPAR yes 28475798
chr1 43462762 43462767 USF2 TRANSFAC yes 28475799
Genes associated with rs12078178[chr1:43462766], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 43148098 43168020 + YBX1 ENSG00000065978.13 43148098 294746 Heart 0.155686 586