EnhancerDB
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  3. rs12083475[chr1:220537370]
Enhancers that have rs12083475[chr1:220537370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs12083475[chr1:220537370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220537315 220537785 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21381678
chr1 220537360 220537378 ESR2 JASPAR yes 35488422
chr1 220537361 220537376 ESR2 JASPAR yes 35488423
chr1 220537363 220537373 MAX JASPAR yes 35488424
chr1 220537363 220537374 USF2 JASPAR yes 35488425
chr1 220537364 220537374 BHLHE40 JASPAR yes 35488426
chr1 220537364 220537374 BHLHE41 JASPAR yes 35488427
chr1 220537364 220537374 MAX JASPAR yes 35488428
chr1 220537364 220537374 MLXIPL JASPAR yes 35488429
chr1 220537364 220537374 MLX JASPAR yes 35488430
chr1 220537364 220537374 MNT JASPAR yes 35488431
chr1 220537364 220537374 SREBF2 JASPAR yes 35488432
chr1 220537364 220537374 TFE3 JASPAR yes 35488433
chr1 220537364 220537374 TFEB JASPAR yes 35488434
chr1 220537364 220537374 TFEC JASPAR yes 35488435
chr1 220537364 220537375 USF1 JASPAR yes 35488436
chr1 220537364 220537375 USF2 JASPAR yes 35488437
chr1 220537365 220537372 USF1 JASPAR yes 35488438
chr1 220537365 220537375 MAX JASPAR yes 35488439
chr1 220537366 220537371 MYC TRANSFAC yes 35488440
chr1 220537366 220537371 USF1 TRANSFAC yes 35488441
chr1 220537366 220537371 USF2 TRANSFAC yes 35488442
chr1 220537370 220537380 RORA JASPAR yes 35488443
Genes associated with rs12083475[chr1:220537370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More