EnhancerDB
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  3. rs12085166[chr1:116870434]
Enhancers that have rs12085166[chr1:116870434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12085166[chr1:116870434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116870350 116870666 ZNF274 GTRD no Liver (HepG2) 21332169
chr1 116870417 116870437 ESR1 JASPAR yes 31795446
chr1 116870420 116870438 ESR2 JASPAR yes 31795447
chr1 116870420 116870438 NR3C1 JASPAR yes 31795448
chr1 116870421 116870438 NR3C2 JASPAR yes 31795449
chr1 116870421 116870439 ESR2 JASPAR yes 31795450
chr1 116870422 116870437 ESR2 JASPAR yes 31795451
chr1 116870428 116870442 E2F7 JASPAR yes 31795452
chr1 116870430 116870436 NFE2 TRANSFAC yes 31795453
Genes associated with rs12085166[chr1:116870434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More