EnhancerDB
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  3. rs12086668[chr1:117011098]
Enhancers that have rs12086668[chr1:117011098]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12086668[chr1:117011098]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117011086 117011100 E2F7 JASPAR yes 31809842
chr1 117011088 117011098 TBX21 JASPAR yes 31809843
chr1 117011088 117011099 TBX20 JASPAR yes 31809844
chr1 117011088 117011099 TBX2 JASPAR yes 31809845
chr1 117011088 117011101 EOMES JASPAR yes 31809846
chr1 117011089 117011099 TBR1 JASPAR yes 31809848
chr1 117011093 117011103 NFKB1 JASPAR yes 31809849
chr1 117011093 117011103 RELA JASPAR yes 31809850
Genes associated with rs12086668[chr1:117011098], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More