EnhancerDB
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  3. rs12090293[chr1:29571478]
Enhancers that have rs12090293[chr1:29571478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29562585 29578758 enh11690
Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs12090293[chr1:29571478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29571468 29571488 RREB1 JASPAR yes 27809156
chr1 29571471 29571491 RREB1 JASPAR yes 27809157
chr1 29571472 29571492 RREB1 JASPAR yes 27809158
chr1 29571475 29571495 RREB1 JASPAR yes 27809159
chr1 29571476 29571488 ZBTB7C JASPAR yes 27809160
Genes associated with rs12090293[chr1:29571478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More