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- rs12090413[chr1:228317768]
Enhancers that have rs12090413[chr1:228317768]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
228316586 |
228321655 |
enh12740 |
|
|
Transcript factors that have rs12090413[chr1:228317768]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
228315394
|
228318284
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21388555
|
|
|
chr1
|
228317220
|
228318064
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21388561
|
|
|
chr1
|
228317320
|
228317935
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21388562
|
|
|
chr1
|
228317556
|
228318196
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21388563
|
|
|
chr1
|
228317763
|
228317775
|
NHLH1
|
JASPAR
|
yes
|
|
35902270
|
|
|
chr1
|
228317764
|
228317774
|
NHLH1
|
JASPAR
|
yes
|
|
35902271
|
|
Genes associated with rs12090413[chr1:228317768], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |