EnhancerDB
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  3. rs12090601[chr1:7540473]
Enhancers that have rs12090601[chr1:7540473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7527289 7545958 enh11454
Astrocyte Adrenal Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs12090601[chr1:7540473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7538625 7540721 ZNF274 GTRD no Bone Marrow (K562) 107801929
chr1 7540453 7540473 RREB1 JASPAR yes 26467895
chr1 7540455 7540475 RREB1 JASPAR yes 26467896
chr1 7540457 7540477 RREB1 JASPAR yes 26467897
chr1 7540459 7540479 RREB1 JASPAR yes 26467898
chr1 7540461 7540481 RREB1 JASPAR yes 26467899
Genes associated with rs12090601[chr1:7540473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More