EnhancerDB
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  3. rs12093708[chr1:42249663]
Enhancers that have rs12093708[chr1:42249663]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12093708[chr1:42249663]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42249647 42249668 IRF1 JASPAR yes 28422171
chr1 42249651 42249669 IRF2 JASPAR yes 28422172
chr1 42249652 42249664 IRF1 JASPAR yes 28422173
Genes associated with rs12093708[chr1:42249663], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More