EnhancerDB
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  3. rs12093775[chr1:42145995]
Enhancers that have rs12093775[chr1:42145995]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12093775[chr1:42145995]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42145989 42145995 NFIC JASPAR yes 28409333
chr1 42145990 42146000 EN2 JASPAR yes 28409334
chr1 42145990 42146000 ESX1 JASPAR yes 28409335
chr1 42145990 42146000 GBX1 JASPAR yes 28409336
chr1 42145990 42146000 GBX2 JASPAR yes 28409337
chr1 42145990 42146000 HESX1 JASPAR yes 28409338
chr1 42145990 42146000 LBX2 JASPAR yes 28409339
chr1 42145990 42146000 LHX2 JASPAR yes 28409340
chr1 42145990 42146000 RAX JASPAR yes 28409341
chr1 42145991 42145995 H1TF2 TRANSFAC yes 28409342
chr1 42145991 42145995 NFE TRANSFAC yes 28409343
chr1 42145991 42145995 SRF TRANSFAC yes 28409344
chr1 42145991 42145999 DLX6 JASPAR yes 28409345
chr1 42145991 42145999 MSX2 JASPAR yes 28409346
Genes associated with rs12093775[chr1:42145995], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More