EnhancerDB
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  3. rs12097553[chr1:29571222]
Enhancers that have rs12097553[chr1:29571222]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29562585 29578758 enh11690
Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs12097553[chr1:29571222]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29571212 29571229 RARA JASPAR yes 27809113
Genes associated with rs12097553[chr1:29571222], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More