EnhancerDB
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  3. rs12117102[chr1:29573280]
Enhancers that have rs12117102[chr1:29573280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29562585 29578758 enh11690
Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs12117102[chr1:29573280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29573264 29573280 T JASPAR yes 27809355
chr1 29573268 29573280 HES5 JASPAR yes 27809356
chr1 29573268 29573280 HES7 JASPAR yes 27809357
chr1 29573268 29573280 PKNOX2 JASPAR yes 27809358
Genes associated with rs12117102[chr1:29573280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More