EnhancerDB
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  3. rs12120546[chr1:200267773]
Enhancers that have rs12120546[chr1:200267773]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs12120546[chr1:200267773]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200267450 200267793 ZNF274 GTRD no Liver (HepG2) 21362913
chr1 200267477 200267786 ZNF274 GTRD no Liver (HepG2) 21362914
chr1 200267524 200268343 ZNF274 GTRD no Liver (HepG2) 21362915
chr1 200267693 200268259 ZNF274 GTRD no Liver (HepG2) 21362916
chr1 200267701 200268185 ZNF143 GTRD no Epithelial (MCF-7) 21362917
chr1 200267703 200268310 ZNF274 GTRD no Liver (HepG2) 21362918
chr1 200267744 200268321 ZNF274 GTRD no Liver (HepG2) 21362919
chr1 200267756 200267776 RREB1 JASPAR yes 34431338
chr1 200267756 200267777 IRF1 JASPAR yes 34431339
chr1 200267761 200267781 RREB1 JASPAR yes 34431341
chr1 200267761 200267782 IRF1 JASPAR yes 34431342
chr1 200267762 200267783 IRF1 JASPAR yes 34431343
chr1 200267763 200267778 FOXP1 JASPAR yes 34431344
chr1 200267767 200267788 IRF1 JASPAR yes 34431345
chr1 200267768 200267774 TCF4 TRANSFAC yes 34431346
chr1 200267768 200267783 FOXP1 JASPAR yes 34431347
chr1 200267769 200267780 FOXP2 JASPAR yes 34431348
chr1 200267769 200267781 FOXC2 JASPAR yes 34431349
chr1 200267773 200267788 MEF2C JASPAR yes 34431350
Genes associated with rs12120546[chr1:200267773], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More