EnhancerDB
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  3. rs12125266[chr1:200407947]
Enhancers that have rs12125266[chr1:200407947]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs12125266[chr1:200407947]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200403827 200409116 AR GTRD no Prostate (PC-3) 21363470
chr1 200406760 200409298 ZNF274 GTRD no Cervix (HeLa-S3) 21363481
chr1 200407168 200412701 ZNF143 GTRD no Epithelial (MCF-7) 21363483
chr1 200407396 200408293 ZNF143 GTRD no Epithelial (MCF-7) 21363484
chr1 200407458 200407987 ZNF274 GTRD no Cervix (HeLa-S3) 21363485
chr1 200407733 200408305 ZNF143 GTRD no Epithelial (MCF-7) 21363487
chr1 200407838 200408294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363488
chr1 200407940 200407950 SP1 JASPAR yes 34447305
chr1 200407940 200407961 ZNF263 JASPAR yes 34447306
chr1 200407942 200407947 SP1 TRANSFAC yes 34447307
chr1 200407942 200407954 HINFP JASPAR yes 34447308
chr1 200407946 200407961 RUNX2 JASPAR yes 34447309
chr1 200407947 200407964 ESR1 JASPAR yes 34447310
Genes associated with rs12125266[chr1:200407947], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More