EnhancerDB
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  3. rs12125906[chr1:17520458]
Enhancers that have rs12125906[chr1:17520458]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17506285 17522712 enh11554
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus
Transcript factors that have rs12125906[chr1:17520458]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17520447 17520468 IRF1 JASPAR yes 27076923
chr1 17520451 17520465 IRF7 JASPAR yes 27076924
chr1 17520451 17520466 IRF9 JASPAR yes 27076925
chr1 17520458 17520464 LEF1 TRANSFAC yes 27076926
chr1 17520458 17520464 SOX10 JASPAR yes 27076927
chr1 17520458 17520473 FOXP1 JASPAR yes 27076928
Genes associated with rs12125906[chr1:17520458], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More