EnhancerDB
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  3. rs12128806[chr1:116860612]
Enhancers that have rs12128806[chr1:116860612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12128806[chr1:116860612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116860591 116860612 IRF1 JASPAR yes 31793930
chr1 116860599 116860614 PRDM1 JASPAR yes 31793931
chr1 116860603 116860615 FOXI1 JASPAR yes 31793932
chr1 116860604 116860616 FOXC2 JASPAR yes 31793933
chr1 116860604 116860617 POU2F2 JASPAR yes 31793934
chr1 116860608 116860623 FOXA1 JASPAR yes 31793936
chr1 116860609 116860621 FOXI1 JASPAR yes 31793937
chr1 116860609 116860624 FOXP1 JASPAR yes 31793938
chr1 116860610 116860622 FOXC2 JASPAR yes 31793939
chr1 116860610 116860624 ONECUT3 JASPAR yes 31793940
chr1 116860611 116860622 FOXB1 JASPAR yes 31793941
chr1 116860611 116860622 FOXC1 JASPAR yes 31793942
chr1 116860611 116860627 POU4F2 JASPAR yes 31793943
chr1 116860611 116860627 POU4F3 JASPAR yes 31793944
chr1 116860612 116860616 YY1 TRANSFAC yes 31793945
chr1 116860612 116860627 FOXA1 JASPAR yes 31793946
Genes associated with rs12128806[chr1:116860612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More