EnhancerDB
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  3. rs12129230[chr1:116922205]
Enhancers that have rs12129230[chr1:116922205]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116912865 116924675 enh582
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs12129230[chr1:116922205]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116922202 116922213 FOXC1 JASPAR yes 31802587
chr1 116922203 116922207 YY1 TRANSFAC yes 31802588
Genes associated with rs12129230[chr1:116922205], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More