EnhancerDB
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  3. rs12129970[chr1:54877581]
Enhancers that have rs12129970[chr1:54877581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54866345 54877955 enh11868
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Uterus Thymus
Transcript factors that have rs12129970[chr1:54877581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54877564 54877585 IRF1 JASPAR yes 28983631
chr1 54877565 54877586 IRF1 JASPAR yes 28983633
chr1 54877566 54877581 FOXP1 JASPAR yes 28983634
chr1 54877567 54877582 FOXP1 JASPAR yes 28983635
chr1 54877567 54877588 IRF1 JASPAR yes 28983636
chr1 54877568 54877583 FOXP1 JASPAR yes 28983637
chr1 54877573 54877594 IRF1 JASPAR yes 28983638
chr1 54877577 54877591 SPI1 JASPAR yes 28983639
Genes associated with rs12129970[chr1:54877581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More