EnhancerDB
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  3. rs12130274[chr1:17520415]
Enhancers that have rs12130274[chr1:17520415]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17506285 17522712 enh11554
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus
Transcript factors that have rs12130274[chr1:17520415]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17520402 17520422 RREB1 JASPAR yes 27076911
chr1 17520412 17520420 GATA1 TRANSFAC yes 27076912
chr1 17520412 17520426 GATA2 JASPAR yes 27076913
chr1 17520414 17520422 GATA3 JASPAR yes 27076914
chr1 17520414 17520422 GATA5 JASPAR yes 27076915
Genes associated with rs12130274[chr1:17520415], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More