EnhancerDB
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  3. rs12130311[chr1:172949847]
Enhancers that have rs12130311[chr1:172949847]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs12130311[chr1:172949847]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172949677 172949953 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350839
chr1 172949697 172949937 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350840
chr1 172949831 172949850 REST JASPAR yes 33174971
chr1 172949844 172949854 SMAD3 JASPAR yes 33174972
Genes associated with rs12130311[chr1:172949847], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More