EnhancerDB
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  3. rs12134879[chr1:42236960]
Enhancers that have rs12134879[chr1:42236960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12134879[chr1:42236960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42236942 42236963 ZNF263 JASPAR yes 28420364
chr1 42236944 42236964 RREB1 JASPAR yes 28420365
chr1 42236945 42236966 ZNF263 JASPAR yes 28420367
chr1 42236946 42236966 RREB1 JASPAR yes 28420369
chr1 42236948 42236968 RREB1 JASPAR yes 28420370
chr1 42236951 42236971 RREB1 JASPAR yes 28420371
chr1 42236952 42236962 ZNF740 JASPAR yes 28420372
chr1 42236956 42236966 SP1 JASPAR yes 28420373
chr1 42236958 42236968 ZNF740 JASPAR yes 28420374
chr1 42236959 42236971 INSM1 JASPAR yes 28420375
Genes associated with rs12134879[chr1:42236960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More