EnhancerDB
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  3. rs12136162[chr1:116862567]
Enhancers that have rs12136162[chr1:116862567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12136162[chr1:116862567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116862548 116862569 IRF1 JASPAR yes 31794236
chr1 116862550 116862571 IRF1 JASPAR yes 31794239
chr1 116862552 116862567 FOXP1 JASPAR yes 31794241
Genes associated with rs12136162[chr1:116862567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More