EnhancerDB
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  3. rs12141544[chr1:232733459]
Enhancers that have rs12141544[chr1:232733459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232723148 232738675 enh12785
Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Heart
Transcript factors that have rs12141544[chr1:232733459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232733438 232733459 IRF1 JASPAR yes 36175591
chr1 232733439 232733460 IRF1 JASPAR yes 36175593
chr1 232733440 232733461 IRF1 JASPAR yes 36175595
chr1 232733441 232733462 IRF1 JASPAR yes 36175597
chr1 232733442 232733463 IRF1 JASPAR yes 36175599
chr1 232733443 232733464 IRF1 JASPAR yes 36175601
chr1 232733444 232733459 FOXP1 JASPAR yes 36175602
chr1 232733444 232733465 IRF1 JASPAR yes 36175603
chr1 232733445 232733460 FOXP1 JASPAR yes 36175604
chr1 232733445 232733466 IRF1 JASPAR yes 36175605
chr1 232733446 232733461 FOXP1 JASPAR yes 36175606
chr1 232733446 232733467 IRF1 JASPAR yes 36175607
chr1 232733447 232733462 FOXP1 JASPAR yes 36175608
chr1 232733450 232733465 PRDM1 JASPAR yes 36175609
chr1 232733450 232733465 STAT2 JASPAR yes 36175610
Genes associated with rs12141544[chr1:232733459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More