EnhancerDB
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  3. rs12142170[chr1:229844782]
Enhancers that have rs12142170[chr1:229844782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229844315 229854512 enh27595
Astrocyte Muscle (A673) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12142170[chr1:229844782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229843484 229845635 ZNF143 GTRD no Epithelial (MCF-7) 21391023
chr1 229843578 229845304 ZNF143 GTRD no Epithelial (MCF-7) 21391024
chr1 229843582 229845225 ZNF143 GTRD no Epithelial (MCF-7) 21391025
chr1 229843597 229845251 ZNF143 GTRD no Epithelial (MCF-7) 21391026
chr1 229843653 229845011 ZNF143 GTRD no Epithelial (MCF-7) 21391027
chr1 229843697 229845309 ZNF143 GTRD no Epithelial (MCF-7) 21391028
chr1 229843698 229845119 ZNF143 GTRD no Epithelial (MCF-7) 21391029
chr1 229843750 229845072 ZNF143 GTRD no Epithelial (MCF-7) 21391030
chr1 229843752 229845150 ZNF143 GTRD no Epithelial (MCF-7) 21391032
chr1 229843757 229845197 ZNF143 GTRD no Epithelial (MCF-7) 21391033
chr1 229843767 229845165 ZNF143 GTRD no Epithelial (MCF-7) 21391035
chr1 229843812 229845251 ZNF143 GTRD no Epithelial (MCF-7) 21391038
chr1 229843827 229845073 ZNF143 GTRD no Epithelial (MCF-7) 21391041
chr1 229843852 229845026 ZNF143 GTRD no Epithelial (MCF-7) 21391043
chr1 229843861 229844959 ZNF143 GTRD no Epithelial (MCF-7) 21391044
chr1 229843913 229844955 ZNF143 GTRD no Epithelial (MCF-7) 21391045
chr1 229843916 229845071 ZNF143 GTRD no Epithelial (MCF-7) 21391046
chr1 229844300 229845149 ZNF143 GTRD no Epithelial (MCF-7) 21391047
chr1 229844336 229845081 ZNF143 GTRD no Epithelial (MCF-7) 21391048
chr1 229844360 229845228 ZNF143 GTRD no Epithelial (MCF-7) 21391049
chr1 229844420 229845054 ZNF143 GTRD no Epithelial (MCF-7) 21391050
chr1 229844420 229845064 ZNF143 GTRD no Epithelial (MCF-7) 21391051
chr1 229844431 229845041 ZNF143 GTRD no Epithelial (MCF-7) 21391052
chr1 229844436 229845053 ZNF143 GTRD no Epithelial (MCF-7) 21391053
chr1 229844443 229845049 ZNF143 GTRD no Epithelial (MCF-7) 21391054
chr1 229844446 229844941 ZNF143 GTRD no Epithelial (MCF-7) 21391055
chr1 229844456 229845131 ZNF143 GTRD no Epithelial (MCF-7) 21391056
chr1 229844472 229845108 ZNF143 GTRD no Epithelial (MCF-7) 21391057
chr1 229844484 229845137 ZNF143 GTRD no Epithelial (MCF-7) 21391058
chr1 229844494 229845072 ZNF143 GTRD no Epithelial (MCF-7) 21391059
chr1 229844504 229845060 ZNF143 GTRD no Epithelial (MCF-7) 21391060
chr1 229844509 229845152 ZNF143 GTRD no Epithelial (MCF-7) 21391061
chr1 229844511 229845228 ZNF143 GTRD no Epithelial (MCF-7) 21391062
chr1 229844517 229845073 ZNF143 GTRD no Epithelial (MCF-7) 21391063
chr1 229844576 229845025 MYOD GTRD no Muscle (Myoblast) 21391064
chr1 229844593 229845112 ZNF143 GTRD no Epithelial (MCF-7) 21391065
chr1 229844601 229845021 ZNF143 GTRD no Epithelial (MCF-7) 21391066
chr1 229844615 229845053 ZNF143 GTRD no Epithelial (MCF-7) 21391067
chr1 229844616 229845080 ZNF143 GTRD no Epithelial (MCF-7) 21391068
chr1 229844697 229844921 ZNF143 GTRD no Epithelial (MCF-7) 21391069
chr1 229844767 229844784 ZNF410 JASPAR yes 35998079
Genes associated with rs12142170[chr1:229844782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More