EnhancerDB
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  3. rs12189669[chr6:35150800]
Enhancers that have rs12189669[chr6:35150800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35131438 35156295 enh23174
Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12189669[chr6:35150800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35150779 35150800 IRF1 JASPAR yes 101265620
chr6 35150780 35150801 IRF1 JASPAR yes 101265621
chr6 35150785 35150806 IRF1 JASPAR yes 101265623
chr6 35150787 35150802 STAT2 JASPAR yes 101265624
chr6 35150788 35150802 STAT1 JASPAR yes 101265625
chr6 35150790 35150811 IRF1 JASPAR yes 101265626
chr6 35150792 35150807 PRDM1 JASPAR yes 101265628
chr6 35150792 35150807 STAT2 JASPAR yes 101265629
chr6 35150796 35150811 LEF1 JASPAR yes 101265630
chr6 35150797 35150802 ETS2 TRANSFAC yes 101265631
Genes associated with rs12189669[chr6:35150800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More