EnhancerDB
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  3. rs12198950[chr6:11495216]
Enhancers that have rs12198950[chr6:11495216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11490425 11502570 enh8949
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Epithelial (MCF-7)
chr6 11495068 11495420 vista50835
VISTA
Transcript factors that have rs12198950[chr6:11495216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11495202 11495221 RFX2 JASPAR yes 70309897
chr6 11495202 11495221 RFX2 JASPAR yes 99893274
chr6 11495206 11495222 RFX2 JASPAR yes 70309898
chr6 11495206 11495222 RFX3 JASPAR yes 70309899
chr6 11495206 11495222 RFX4 JASPAR yes 70309900
chr6 11495206 11495222 RFX5 JASPAR yes 70309901
chr6 11495206 11495222 RFX2 JASPAR yes 99893275
chr6 11495206 11495222 RFX3 JASPAR yes 99893276
chr6 11495206 11495222 RFX4 JASPAR yes 99893277
chr6 11495206 11495222 RFX5 JASPAR yes 99893278
chr6 11495207 11495226 RFX2 JASPAR yes 70309902
chr6 11495207 11495226 RFX2 JASPAR yes 99893279
Genes associated with rs12198950[chr6:11495216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More