EnhancerDB
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  3. rs12300002[chr12:54613577]
Enhancers that have rs12300002[chr12:54613577]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54604917 54618893 enh2376
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus
Transcript factors that have rs12300002[chr12:54613577]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54613089 54613620 ZNF274 GTRD no Bone Marrow (K562) 21550424
chr12 54613556 54613577 IRF1 JASPAR yes 121029700
chr12 54613562 54613583 IRF1 JASPAR yes 121029702
chr12 54613567 54613588 IRF1 JASPAR yes 121029703
chr12 54613572 54613587 FOXP1 JASPAR yes 121029704
chr12 54613572 54613593 IRF1 JASPAR yes 121029705
chr12 54613576 54613591 STAT2 JASPAR yes 121029706
chr12 54613577 54613592 FOXP1 JASPAR yes 121029707
chr12 54613577 54613598 IRF1 JASPAR yes 121029708
Genes associated with rs12300002[chr12:54613577], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More