EnhancerDB
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  3. rs12316391[chr12:51782070]
Enhancers that have rs12316391[chr12:51782070]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 51775445 51784425 enh14719
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Lung (PC-9) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12316391[chr12:51782070]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 51782060 51782075 TFAP2A JASPAR yes 120886675
chr12 51782060 51782075 TFAP2C JASPAR yes 120886676
chr12 51782062 51782077 TFAP2C JASPAR yes 120886677
chr12 51782063 51782074 TFAP2A JASPAR yes 120886678
chr12 51782063 51782074 TFAP2B JASPAR yes 120886679
chr12 51782063 51782074 TFAP2C JASPAR yes 120886680
chr12 51782064 51782073 TFAP2A JASPAR yes 120886681
Genes associated with rs12316391[chr12:51782070], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 51745031 51786651 - GALNT6 ENSG00000139629.11 51786651 0 Esophagus 1.9005e-08 12068